Molecular Dynamics
LAMMPS workflows end to end: system construction, force-field selection, equilibration, production runs, and post-processing of classical molecular systems.
Bhusal, A. (2016 – present). Pokhara, Nepal.
Research associate at Physics Research Initiatives. I run molecular dynamics of CO2 capture in metal–organic frameworks and shale nanopores, apply machine learning to materials problems, and teach researchers to turn Python into a scientific instrument.
Keywords molecular dynamics · CO2 sequestration · metal–organic frameworks · HPC · machine learning · scientific Python
My career began in physics and grew into a cross-disciplinary practice: designing computational experiments, interpreting simulation data, building the tools in between — and helping students turn research questions into defensible results.
At Physics Research Initiatives I contribute to research on CO2 huff-n-puff and enhanced oil recovery, nanopore fluid behavior, MOF-based carbon capture, and molecular-scale materials. Alongside the research I supervise dissertations, edit the Himalayan Physics Journal, and run Python training programs for scientific audiences.
A research stack built for computation-heavy science — from atomistic simulation to the web pages that publish it.
LAMMPS workflows end to end: system construction, force-field selection, equilibration, production runs, and post-processing of classical molecular systems.
Regression, classification, and clustering for materials questions — data-driven screening of porous materials and gas-adsorption behavior.
SLURM job scripting, multi-node resource management, and large-scale simulation and analysis pipelines on shared clusters.
Gaussian-based quantum chemistry: molecular orbitals, charge density, electrostatic potential, and mechanochemical response.
Research automation, analysis, and publication-grade visualization — and the training programs that teach others to do the same.
Responsive sites and data-facing interfaces with plain HTML, CSS, and JavaScript — maintainable front-ends and deployment workflows.
Overseeing peer review, coordinating authors and reviewers, and preparing manuscripts through LaTeX-based publication workflows.
Computational modeling, CO2 huff-n-puff collaboration, molecular simulation, dissertation supervision, and Python training programs.
Editorial operations, manuscript handling, peer-review quality, and journal production.
NEPSE market analysis with fundamental and technical indicators, Python tooling, and the company's web presence.
Prithvi Narayan Campus. Graduated with a 3.59 / 4.0 CGPA.
Prithvi Narayan Campus. First Division distinction.
Projects where the research, the data, and the software had to work together.
Collaborative modeling of CO2 behavior in inorganic nanopores — supporting enhanced oil recovery insight and minimum-miscibility-pressure estimation, with China-based research partners.
Hybrid GCMC/MD studies of carbon capture in MOF-177 and MOF-74, including how humidity reshapes adsorption in ultraporous materials.
Python workflows for spotting under- and over-valued stocks from live Nepal Stock Exchange data — financial ratios, trend analysis, and web publishing for investors.
Designed and taught training that moves students and professionals from basic syntax to real scientific workflows — analysis, visualization, and hands-on projects.
Published work across molecular simulation, materials, and energy systems.
Adhikari, B., Bhusal, A., Sun, Q., & Adhikari, K. (2025). Humidity-dependent CO2 capture in ultraporous MOF-177: insights from hybrid GCMC/MD simulations. Computational and Theoretical Chemistry, 1253.
doi:10.1016/j.comptc.2025.115419Bhusal, A., Adhikari, K., & Sun, Q. (2024). A hybrid density functional study on mechanochemistry of silicon carbide nanotubes. RSC Mechanochemistry.
doi:10.1039/D4MR00043ASubedi, A., Adhikari, B., Bhusal, A., & Adhikari, K. (2024). Molecular insights into CO2 sequestration in MOF-74. Journal of Institute of Science and Technology, 29(2), 65–73.
doi:10.3126/jist.v29i2.66020Adhikari, B., Subedi, A., Bhusal, A., & Adhikari, K. (2024). Molecular simulation of H2O in Mg-MOF-74. Journal of Institute of Science and Technology.
Sun, Q., Zhang, N., Zhu, P., Li, W., Guo, L., Fu, S., Bhusal, A., & Wang, S. (2024). Confined fluid interfacial tension and minimum miscibility pressure prediction in shale nanopores. Fuel, 364.
doi:10.1016/j.fuel.2024.130949Sun, Q., Bhusal, A., Zhang, N., & Adhikari, K. (2023). Molecular insight into minimum miscibility pressure estimation of shale oil/CO2 in inorganic nanopores using CO2 huff-n-puff. Chemical Engineering Science, 280, 119024.
doi:10.1016/j.ces.2023.119024Bhusal, A., & Adhikari, K. (2023). Melting curve of cobalt using molecular dynamics simulation. Prithvi Academic Journal, 6(1), 1–10.
doi:10.3126/paj.v6i1.54570Bhusal, A., Gurung, S., & Adhikari, K. (2023). Setting research priority areas for the Gandaki Province. Journal of Engineering and Sciences, 1(1), 50–56.
doi:10.3126/jes2.v1i1.58402Sun, Q., Zhang, N., Liu, W., Li, B., Li, S., Bhusal, A., Wang, S., & Li, Z. (2023). Insights into enhanced oil recovery by thermochemical fluid flooding for ultra-heavy reservoirs: an experimental study. Fuel, 331.
doi:10.1016/j.fuel.2022.125651Sun, Q., Zhang, N., Liu, W., Li, B., Li, S., Bhusal, A., Wang, S., & Li, Z. (2023). Experimental study on thermochemical composite system huff-n-puff process in ultra-heavy oil production. Fuel, 331.
doi:10.1016/j.fuel.2022.126014Tiwari, M., Bhusal, A., & Adhikari, K. (2019). Study of mechanochemistry of carbon nanotube using first principle. Himalayan Physics, 8, 39–46.
doi:10.3126/hp.v8i0.30000Bhusal, A. (2023). Estimating minimum miscibility pressure of shale oil/CO2 in inorganic nanopores using CO2 huff-n-puff. Virtual LAMMPS Workshop & Symposium, August 8–11.
conference talkBhusal, A. (2022). Molecular insight into CO2 huff-n-puff EOR performance and minimum miscibility pressure estimation in organic nanopores. National Conference on Recent Trends in Science, Technology and Innovation, Pokhara, May 29–30.
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Open to research collaboration, scientific software, and technical consulting. If your work involves molecular simulation, data-heavy engineering, or practical tools for research teams — write to me.
aabiskar@pri.org.np