LAMMPS workflows end to end: system construction, selection, , production runs, and post-processing of classical molecular systems.
Bhusal, A. (2016 – present). Pokhara, Nepal.
I use molecular dynamics and DFT
to understand how materials behave at the atomic scale.
Eleven papers since 2016 trace that work through CO2 capture in metal–organic frameworks, nanopore fluid behavior in shale, and the machine-learning models that screen candidate materials.
Keywords molecular dynamics · CO2 sequestration · metal–organic frameworks · HPC · machine learning · scientific Python
- 11journal articles
- 2016–nowresearch practice
- CO2capture & simulation
- 0Google Scholar citations
Introduction
My career began in physics and grew into a cross-disciplinary practice: designing computational experiments, interpreting simulation data, building the tools in between — and helping students turn research questions into defensible results.
At Physics Research Initiatives I contribute to research on CO2 huff-n-puff and enhanced oil recovery, fluid behavior, carbon capture, and molecular-scale materials. Alongside the research I supervise dissertations, edit the Himalayan Physics Journal, and run Python training programs for scientific audiences.
- BasePokhara, Nepal
- AffiliationPhysics Research Initiatives
- EditorialEditor-in-Chief · Himalayan Physics Journal
- TeachingScientific Python programs
Expertise
A research stack built for computation-heavy science — from atomistic simulation to the web pages that publish it.
Machine Learning for Materials
Regression, classification, and clustering for materials questions — data-driven screening of porous materials and gas-adsorption behavior.
High-Performance Computing
SLURM job scripting, multi-node resource management, and large-scale simulation and analysis pipelines on shared clusters — built for reliable, reproducible throughput.
Electronic Structure
Gaussian-based quantum chemistry: molecular orbitals, charge density, electrostatic potential, and mechanochemical response.
Scientific Python
Research automation, analysis, and publication-grade visualization — and the training programs that teach others to do the same.
Software & Web
Data-facing applications and research tools with Python, Django, and JavaScript — supported by LaTeX authoring, Fortran workflows, and maintainable deployment practices.
Chip-Level Laptop Repair
Certified technician
Board-level diagnostics and precision microsoldering for power rails, charging circuits, embedded controllers, and component-level fault isolation.
- Multimeters
- Oscilloscopes
- Soldering stations
Read the lab notes → — short technical write-ups from this stack, including LAMMPS/MOF setup and SLURM job patterns.
From methods to applied research follow the chronology →
Chronology
Appointments, editorial service, teaching, and education.
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2023 — now
Editor-in-ChiefHimalayan Physics Journal
Overseeing peer review, coordinating authors and reviewers, and preparing manuscripts through LaTeX-based publication workflows.
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2016 — now
Research AssociatePhysics Research Initiatives
Computational modeling, CO2 huff-n-puff collaboration, molecular simulation, dissertation supervision, and Python training programs.
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2022 — 2023
Assistant ProfessorPokhara University
Taught “Programming for Bioinformatics” to graduate students of Bioinformatics.
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2019 — 2023
Co-EditorHimalayan Physics Journal
Editorial operations, manuscript handling, peer-review quality, and journal production.
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2018 — 2019
Data AnalystPokhara Investment Company
NEPSE market analysis with fundamental and technical indicators, Python tooling, and the company's web presence.
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2016
M.Sc. PhysicsTribhuvan University
Prithvi Narayan Campus. Graduated with a 3.59 / 4.0 CGPA.
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2013
B.Sc. PhysicsTribhuvan University
Prithvi Narayan Campus. First Division.
From experience to applied outcomes see selected work →
Professional record
Formal learning, training faculty work, and service to the physics community.
Verified learning
Professional certificates
Applied foundations in Python, data science, machine learning, artificial intelligence, and computational materials physics.
DataCamp · four tracks
University of Michigan
University of Helsinki
Ghent University · 60+ hours
Training faculty
Programs facilitated
Expert-led Python and data-analysis instruction delivered for university and research audiences.
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Modern Approaches to Data Analysis
Facilitated a two-day expert workshop for the Faculty of Science and Technology, Pokhara University.
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Training on Python Programming
Facilitated as an expert for the Department of Electronics and Computer Engineering, Paschimanchal Campus, Tribhuvan University.
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Python for Master-Level Faculties
Facilitated as an expert for the Institute of Engineering, Paschimanchal Campus, Tribhuvan University.
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Three-Day Immersion Course on Python
Facilitated as an expert for Physics Research Initiatives.
Community service
Professional memberships
Contributing to the local physics community through society service, editorial engagement, and research leadership.
- Editorial memberNepal Physical Society · Gandaki Chapter
- Executive memberPhysics Research Initiatives
- MemberNepal Physical Society
From professional practice to applied outcomes see selected work →
Selected Work
Projects where the research, the data, and the software had to work together.
CO2 huff-n-puff in shale nanopores
Collaborative modeling of CO2 behavior in inorganic nanopores — supporting enhanced oil recovery insight and minimum-miscibility-pressure estimation, with China-based research partners.
Outcome: molecular insight into minimum miscibility pressure in shale oil/CO2 systems.
Read publicationStudy details
- Question
- How do confinement and CO2 injection conditions shape shale-oil behaviour?
- Method
- Molecular simulation of inorganic nanopores and fluid interactions.
- Outcome
- Interfacial-tension and minimum-miscibility-pressure insight for confined fluids.
MOF adsorption research programme
Related GCMC/MD studies across MOF-177 and MOF-74 examine adsorption, molecular mobility, and framework–adsorbate interactions. The definitive humidity-dependent MOF-177 record appears once above as the flagship publication.
Programme: comparative molecular-simulation work on CO2 capture in porous frameworks.
Read publicationStudy details
- Question
- How does humidity alter CO2 adsorption?
- Method
- Hybrid GCMC/MD simulations of MOF-177 and MOF-74.
- Outcome
- Humidity-dependent changes in uptake, structure, and molecular mobility.
CO2 uptake predictor
Browser-local XGBoost model estimating MOF CO2 adsorption from eight structural and thermodynamic descriptors, with exact TreeSHAP explanations for each prediction.
Boundary: trained on the study archive through 16 bar; treat predictions beyond that pressure range as extrapolation, not measurement.
- 773 trees
- R² 0.979 reported test metric
- local-only execution
Market analysis tooling for NEPSE
Python workflows for spotting under- and over-valued stocks from live Nepal Stock Exchange data — financial ratios, trend analysis, and web publishing for investors. The pipeline turns raw market data into repeatable, publication-ready signals.
Focus: repeatable analysis workflows that make market signals easier to inspect.
- 01Collectmarket prices and company fundamentals
- 02Assessratios, trends, and valuation signals
- 03Publishclear views for investor review
Study details
- Question
- Which NEPSE signals merit closer review?
- Method
- Reusable Python workflows for ratios, trends, and publication-ready analysis.
- Outcome
- Repeatable signals that remain inspectable instead of becoming opaque recommendations.
CIME CBT — complete examination platform
An institution-ready Django platform covering enrollment, question banks, exam scheduling, secure test delivery, live monitoring, automatic scoring, analysis, and multi-format reporting.
Outcome: one role-based system for the complete examination lifecycle, delivered for 200+ students and packaged for local Windows and macOS deployment.
- 200+ students supported
- Live invigilation
- PDF · XLSX · CSV reports
Build details
- Question
- How can an institution manage the full digital-examination lifecycle without stitching together separate tools?
- Method
- Dedicated administrative, teacher, and student experiences with autosaving, invigilation, scoring, reporting, and backups.
- Outcome
- An institution-ready platform delivered for more than 200 students.
Python programs for researchers
Designed and taught training that moves students and professionals from basic syntax to real scientific workflows — analysis, visualization, and hands-on projects.
Focus: turning research questions into reproducible analysis and visualisation workflows.
Ask about trainingStudy details
- Question
- How can researchers move beyond syntax?
- Method
- Guided practice in data analysis, visualisation, and reproducible scientific workflows.
- Outcome
- Training organised around real research tasks and repeatable working habits.
The published record behind these projects browse references →
Research Library
Published work across molecular simulation, materials, and energy systems.
Showing all 13 publications and talks.
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[1]
Adhikari, B., Bhusal, A., Sun, Q., & Adhikari, K. (2025). Humidity-dependent CO2 capture in ultraporous MOF-177: insights from hybrid GCMC/MD simulations. Computational and Theoretical Chemistry, 1253.
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[2]
Bhusal, A., Adhikari, K., & Sun, Q. (2024). A hybrid density functional study on mechanochemistry of silicon carbide nanotubes. RSC Mechanochemistry.
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[3]
Subedi, A., Adhikari, B., Bhusal, A., & Adhikari, K. (2024). Molecular insights into CO2 sequestration in MOF-74. Journal of Institute of Science and Technology, 29(2), 65–73.
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[4]
Adhikari, B., Subedi, A., Bhusal, A., & Adhikari, K. (2024). Molecular simulation of H2O adsorption in Mg-MOF-74. Journal of Engineering and Sciences, 3(2), 1–13.
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[5]
Sun, Q., Zhang, N., Zhu, P., Li, W., Guo, L., Fu, S., Bhusal, A., & Wang, S. (2024). Confined fluid interfacial tension and minimum miscibility pressure prediction in shale nanopores. Fuel, 364.
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[6]
Sun, Q., Bhusal, A., Zhang, N., & Adhikari, K. (2023). Molecular insight into minimum miscibility pressure estimation of shale oil/CO2 in inorganic nanopores using CO2 huff-n-puff. Chemical Engineering Science, 280, 119024.
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[7]
Bhusal, A., & Adhikari, K. (2023). Melting curve of cobalt using molecular dynamics simulation. Prithvi Academic Journal, 6(1), 1–10.
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[8]
Bhusal, A., Gurung, S., & Adhikari, K. (2023). Setting research priority areas for the Gandaki Province. Journal of Engineering and Sciences, 1(1), 50–56.
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[9]
Sun, Q., Zhang, N., Liu, W., Li, B., Li, S., Bhusal, A., Wang, S., & Li, Z. (2023). Insights into enhanced oil recovery by thermochemical fluid flooding for ultra-heavy reservoirs: an experimental study. Fuel, 331.
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[10]
Sun, Q., Zhang, N., Liu, W., Li, B., Li, S., Bhusal, A., Wang, S., & Li, Z. (2023). Experimental study on thermochemical composite system huff-n-puff process in ultra-heavy oil production. Fuel, 331.
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[11]
Tiwari, M., Bhusal, A., & Adhikari, K. (2019). Study of mechanochemistry of carbon nanotube using first principle. Himalayan Physics, 8, 39–46.
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[12]
Bhusal, A. (2023). Estimating minimum miscibility pressure of shale oil/CO2 in inorganic nanopores using CO2 huff-n-puff. Virtual LAMMPS Workshop & Symposium, August 8–11.
conference talk -
[13]
Bhusal, A. (2022). Molecular insight into CO2 huff-n-puff EOR performance and minimum miscibility pressure estimation in organic nanopores. National Conference on Recent Trends in Science, Technology and Innovation, Pokhara, May 29–30.
conference talk
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Correspondence
Open to research collaboration, scientific computing, and technical consulting. If your work involves molecular simulation, data-heavy engineering, or practical tools for research teams — write to me.
Propose a collaborationaabiskar@pri.org.np→A useful first note includes your question, current evidence, and intended timeline.
Or file your decision the way reviewers do:
Each opens a prefilled draft — every author knows which button you'll pick.
- researchgate Aabiskar-Bhusal-2
- orcid 0000-0003-3538-2005
- scholar view profile
- linkedin /in/AabiskarBhusal
- github @hyperonx
- location Pokhara, Nepal
- languages Nepali · English · Hindi
Ways to collaborate
Available worldwide- Research collaborationJoint studies, methods, and publications
- Simulation consultingMD, GCMC, DFT, and reproducible workflows
- Scientific-Python trainingPractical programs for research teams
- Dissertation supervisionTechnical guidance from question to results